topic Alfresco failed to start , Mysql5.5 reinstalled in Alfresco Archive https://connect.hyland.com/t5/alfresco-archive/alfresco-failed-to-start-mysql5-5-reinstalled/m-p/308726#M261856 <HTML><HEAD></HEAD><BODY><SPAN>I’m running into a blocker issue, Can someone reply to this earliest?</SPAN><BR /><BR /><SPAN>I have a ubuntu system where alfresco enterprise edition3.4.5 was already installed.</SPAN><BR /><BR /><SPAN>I reinstalled Mysql5.5 as it was corrupt,din’t take any back up of db.</SPAN><BR /><BR /><SPAN>Below are the steps followed.</SPAN><BR /><BR /><SPAN>Stopped Mysql</SPAN><BR /><SPAN>Stopped alfresco</SPAN><BR /><SPAN>Deleted all Mysql related installables ( no back up is taken)</SPAN><BR /><SPAN>Installed Mysql5.5</SPAN><BR /><SPAN>Started Mysql</SPAN><BR /><SPAN>Created alfresco user with necessary permissions</SPAN><BR /><SPAN>Removed contentstore, contentstore.deleted and lucene indexes.</SPAN><BR /><SPAN>Started alfresco but it throws below error.</SPAN><BR /><SPAN>S/W details:</SPAN><BR /><SPAN>———</SPAN><BR /><SPAN>x86_64 GNU/Linux Ubuntu</SPAN><BR /><SPAN>Alfresco - 3.4.5</SPAN><BR /><SPAN>Mysql - 5.5</SPAN><BR /><BR /><SPAN>Is there any initialize script for populating DB and keep in sync with alfresco as DB is a fresh db?</SPAN><BR /><SPAN>(OR) What am I missing something else</SPAN><BR /><SPAN>Error log:</SPAN><BR /><BR /><SPAN>Apr 17, 2015 1:36:18 PM org.apache.catalina.core.AprLifecycleListener init</SPAN><BR /><SPAN>INFO: The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: /opt/alfresco-3.4.5/java/jre/lib/amd64/server:/opt/alfresco-3.4.5/java/jre/lib/amd64:/opt/alfresco-3.4.5/java/jre/../lib/amd64:/opt/alfresco-3.4.5/common/lib::/usr/java/packages/lib/amd64:/usr/lib64:/lib64:/lib:/usr/lib</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.coyote.http11.Http11Protocol init</SPAN><BR /><SPAN>INFO: Initializing Coyote HTTP/1.1 on http-8180</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.catalina.startup.Catalina load</SPAN><BR /><SPAN>INFO: Initialization processed in 387 ms</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.catalina.core.StandardService start</SPAN><BR /><SPAN>INFO: Starting service Catalina</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.catalina.core.StandardEngine start</SPAN><BR /><SPAN>INFO: Starting Servlet Engine: Apache Tomcat/6.0.29</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.catalina.startup.HostConfig deployDescriptor</SPAN><BR /><SPAN>INFO: Deploying configuration descriptor ROOT.xml</SPAN><BR /><SPAN>Apr 17, 2015 1:36:19 PM org.apache.catalina.core.StandardContext addApplicationListener</SPAN><BR /><SPAN>INFO: The listener "org.apache.myfaces.webapp.StartupServletContextListener" is already configured for this context. The duplicate definition has been ignored.</SPAN><BR /><SPAN>13:36:24,311&nbsp; INFO&nbsp; [alfresco.config.JndiPropertiesFactoryBean] Loading properties file from class path resource [alfresco/repository.properties]</SPAN><BR /><SPAN>13:36:24,313&nbsp; INFO&nbsp; [alfresco.config.JndiPropertiesFactoryBean] Loading properties file from class path resource [alfresco/domain/transaction.properties]</SPAN><BR /><SPAN>13:36:24,313&nbsp; INFO&nbsp; [alfresco.config.JndiPropertiesFactoryBean] Loading properties file from file [/opt/alfresco-3.4.5/tomcat/webapps/ROOT/WEB-INF/classes/alfresco/module/test/alfresco-global.properties]</SPAN><BR /><SPAN>13:36:24,313&nbsp; INFO&nbsp; [alfresco.config.JndiPropertiesFactoryBean] Loading properties file from URL [file:/opt/alfresco-3.4.5/tomcat/shared/classes/alfresco-global.properties]</SPAN><BR /><SPAN>13:36:24,354&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/version.properties]</SPAN><BR /><SPAN>13:36:24,397&nbsp; INFO&nbsp; [alfresco.config.JndiPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/alfresco-shared.properties]</SPAN><BR /><SPAN>13:36:24,420&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/domain/cache-strategies.properties]</SPAN><BR /><SPAN>13:36:24,938&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Starting 'sysAdmin' subsystem, ID: [sysAdmin, default]</SPAN><BR /><SPAN>13:36:24,966&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/version.properties]</SPAN><BR /><SPAN>13:36:24,966&nbsp; INFO&nbsp; [alfresco.config.JndiPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/alfresco-shared.properties]</SPAN><BR /><SPAN>13:36:24,967&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/domain/cache-strategies.properties]</SPAN><BR /><SPAN>13:36:24,973&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Startup of 'sysAdmin' subsystem, ID: [sysAdmin, default] complete</SPAN><BR /><SPAN>13:36:34,161&nbsp; INFO&nbsp; [extensions.webscripts.TemplateProcessorRegistry] Registered template processor Repository Template Processor for extension ftl</SPAN><BR /><SPAN>13:36:34,162&nbsp; INFO&nbsp; [extensions.webscripts.ScriptProcessorRegistry] Registered script processor Repository Script Processor for extension js</SPAN><BR /><SPAN>java.net.UnknownHostException: basename</SPAN><BR /><SPAN>at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:177)</SPAN><BR /><SPAN>at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:366)</SPAN><BR /><SPAN>at java.net.Socket.connect(Socket.java:529)</SPAN><BR /><SPAN>at java.net.Socket.connect(Socket.java:478)</SPAN><BR /><SPAN>at sun.net.NetworkClient.doConnect(NetworkClient.java:163)</SPAN><BR /><SPAN>at sun.net.NetworkClient.openServer(NetworkClient.java:118)</SPAN><BR /><SPAN>at sun.net.ftp.FtpClient.openServer(FtpClient.java:488)</SPAN><BR /><SPAN>at sun.net.ftp.FtpClient.openServer(FtpClient.java:475)</SPAN><BR /><SPAN>at sun.net.</SPAN><A _jive_internal="true" href="https://community.alfresco.com/www.protocol.ftp.FtpURLConnection.connect(FtpURLConnection.java:270)" rel="nofollow noopener noreferrer">www.protocol.ftp.FtpURLConnection.connect(FtpURLConnection.java:270)</A><BR /><SPAN>at sun.net.</SPAN><A _jive_internal="true" href="https://community.alfresco.com/www.protocol.ftp.FtpURLConnection.getInputStream(FtpURLConnection.java:352)" rel="nofollow noopener noreferrer">www.protocol.ftp.FtpURLConnection.getInputStream(FtpURLConnection.java:352)</A><BR /><SPAN>at java.net.URL.openStream(URL.java:1010)</SPAN><BR /><SPAN>at org.apache.xml.resolver.Catalog.parseCatalogFile(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.Catalog.parsePendingCatalogs(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.Catalog.parseCatalog(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.Catalog.loadSystemCatalogs(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.CatalogManager.getPrivateCatalog(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.CatalogManager.getCatalog(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.tools.CatalogResolver.initializeCatalogs(Unknown Source)</SPAN><BR /><SPAN>at org.apache.xml.resolver.tools.CatalogResolver.&lt;init&gt;(Unknown Source)</SPAN><BR /><SPAN>at org.apache.cxf.catalog.OASISCatalogManager.getResolver(OASISCatalogManager.java:69)</SPAN><BR /><SPAN>at org.apache.cxf.catalog.OASISCatalogManager.&lt;init&gt;(OASISCatalogManager.java:58)</SPAN><BR /><SPAN>at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)</SPAN><BR /><SPAN>at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)</SPAN><BR /><SPAN>at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)</SPAN><BR /><SPAN>at java.lang.reflect.Constructor.newInstance(Constructor.java:513)</SPAN><BR /><SPAN>at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:126)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:72)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:938)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:890)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189)</SPAN><BR /><SPAN>at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:557)</SPAN><BR /><SPAN>at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:842)</SPAN><BR /><SPAN>at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:416)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:261)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:192)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)</SPAN><BR /><SPAN>at org.alfresco.web.app.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:63)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321)</SPAN><BR /><SPAN>at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardHost.start(StandardHost.java:785)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardService.start(StandardService.java:519)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardServer.start(StandardServer.java:710)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Catalina.start(Catalina.java:581)</SPAN><BR /><SPAN>at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)</SPAN><BR /><SPAN>at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)</SPAN><BR /><SPAN>at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)</SPAN><BR /><SPAN>at java.lang.reflect.Method.invoke(Method.java:597)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)</SPAN><BR /><SPAN>13:36:39,261&nbsp; INFO&nbsp; [domain.schema.SchemaBootstrap] Schema managed by database dialect org.hibernate.dialect.MySQLInnoDBDialect.</SPAN><BR /><SPAN>13:36:39,440&nbsp; INFO&nbsp; [domain.schema.SchemaBootstrap] No changes were made to the schema.</SPAN><BR /><SPAN>13:36:40,448&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Starting 'thirdparty' subsystem, ID: [thirdparty, default]</SPAN><BR /><SPAN>13:36:40,459&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/version.properties]</SPAN><BR /><SPAN>13:36:40,459&nbsp; INFO&nbsp; [alfresco.config.JndiPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/alfresco-shared.properties]</SPAN><BR /><SPAN>13:36:40,460&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/domain/cache-strategies.properties]</SPAN><BR /><SPAN>13:36:40,589&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Startup of 'thirdparty' subsystem, ID: [thirdparty, default] complete</SPAN><BR /><SPAN>13:36:40,589&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Starting 'OOoDirect' subsystem, ID: [OOoDirect, default]</SPAN><BR /><SPAN>13:36:40,599&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/version.properties]</SPAN><BR /><SPAN>13:36:40,599&nbsp; INFO&nbsp; [alfresco.config.JndiPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/alfresco-shared.properties]</SPAN><BR /><SPAN>13:36:40,599&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/domain/cache-strategies.properties]</SPAN><BR /><SPAN>13:36:41,037&nbsp; WARN&nbsp; [alfresco.util.OpenOfficeConnectionTester] An initial OpenOffice connection could not be established.</SPAN><BR /><SPAN>13:36:41,043&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Startup of 'OOoDirect' subsystem, ID: [OOoDirect, default] complete</SPAN><BR /><SPAN>13:36:41,048&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Starting 'OOoJodconverter' subsystem, ID: [OOoJodconverter, default]</SPAN><BR /><SPAN>13:36:41,095&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/version.properties]</SPAN><BR /><SPAN>13:36:41,096&nbsp; INFO&nbsp; [alfresco.config.JndiPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/alfresco-shared.properties]</SPAN><BR /><SPAN>13:36:41,096&nbsp; INFO&nbsp; [alfresco.config.FixedPropertyPlaceholderConfigurer] Loading properties file from class path resource [alfresco/domain/cache-strategies.properties]</SPAN><BR /><SPAN>13:36:41,136&nbsp; INFO&nbsp; [management.subsystems.ChildApplicationContextFactory] Startup of 'OOoJodconverter' subsystem, ID: [OOoJodconverter, default] complete</SPAN><BR /><SPAN>13:36:41,292&nbsp; WARN&nbsp; [node.index.FullIndexRecoveryComponent] The indexes are not synchronized with the database.</SPAN><BR /><SPAN>13:36:41,341&nbsp; WARN&nbsp; [node.index.AVMFullIndexRecoveryComponent]&nbsp;&nbsp;&nbsp;&nbsp; Index for avm store sitestore is out of date</SPAN><BR /><SPAN>13:36:41,506&nbsp; WARN&nbsp; [service.descriptor.DescriptorService] Alfresco license: Failed to verify license - Invalid License!</SPAN><BR /><SPAN>13:36:41,506&nbsp; WARN&nbsp; [service.descriptor.DescriptorService] Alfresco license: Restricted Alfresco Repository to read-only capability</SPAN><BR /><SPAN>13:36:41,535&nbsp; INFO&nbsp; [repo.admin.ConfigurationChecker] The Alfresco root data directory ('dir.root') is: /opt/alfresco-3.4.5/alf_data</SPAN><BR /><SPAN>13:36:41,606&nbsp; ERROR [repo.admin.ConfigurationChecker] CONTENT INTEGRITY ERROR: Indexes not found for 7 stores.</SPAN><BR /><SPAN>13:36:41,606&nbsp; INFO&nbsp; [repo.admin.ConfigurationChecker] You may set 'index.recovery.mode=FULL' if you need to rebuild the indexes.</SPAN><BR /><SPAN>13:36:41,606&nbsp; ERROR [repo.admin.ConfigurationChecker] CONTENT INTEGRITY ERROR: System content not found in content store.</SPAN><BR /><SPAN>13:36:41,607&nbsp; ERROR [repo.admin.ConfigurationChecker] Ensure that the 'dir.root' property is pointing to the correct data location.</SPAN><BR /><SPAN>13:36:41,609&nbsp; ERROR [web.context.ContextLoader] Context initialization failed</SPAN><BR /><SPAN>org.alfresco.error.AlfrescoRuntimeException: 03170000 Ensure that the 'dir.root' property is pointing to the correct data location.</SPAN><BR /><SPAN>at org.alfresco.repo.admin.ConfigurationChecker.check(ConfigurationChecker.java:332)</SPAN><BR /><SPAN>at org.alfresco.repo.admin.ConfigurationChecker.access$000(ConfigurationChecker.java:68)</SPAN><BR /><SPAN>at org.alfresco.repo.admin.ConfigurationChecker$1.execute(ConfigurationChecker.java:180)</SPAN><BR /><SPAN>at org.alfresco.repo.transaction.RetryingTransactionHelper.doInTransaction(RetryingTransactionHelper.java:381)</SPAN><BR /><SPAN>at org.alfresco.repo.transaction.RetryingTransactionHelper.doInTransaction(RetryingTransactionHelper.java:272)</SPAN><BR /><SPAN>at org.alfresco.repo.admin.ConfigurationChecker.onBootstrap(ConfigurationChecker.java:184)</SPAN><BR /><SPAN>at org.springframework.extensions.surf.util.AbstractLifecycleBean.onApplicationEvent(AbstractLifecycleBean.java:56)</SPAN><BR /><SPAN>at org.springframework.context.event.SimpleApplicationEventMulticaster.multicastEvent(SimpleApplicationEventMulticaster.java:97)</SPAN><BR /><SPAN>at org.alfresco.repo.management.SafeApplicationEventMulticaster.multicastEvent(SafeApplicationEventMulticaster.java:78)</SPAN><BR /><SPAN>at org.springframework.context.support.AbstractApplicationContext.publishEvent(AbstractApplicationContext.java:294)</SPAN><BR /><SPAN>at org.springframework.context.support.AbstractApplicationContext.finishRefresh(AbstractApplicationContext.java:858)</SPAN><BR /><SPAN>at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:419)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:261)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:192)</SPAN><BR /><SPAN>at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)</SPAN><BR /><SPAN>at org.alfresco.web.app.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:63)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4135)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardContext.start(StandardContext.java:4630)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277)</SPAN><BR /><SPAN>at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321)</SPAN><BR /><SPAN>at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardHost.start(StandardHost.java:785)</SPAN><BR /><SPAN>at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:445)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardService.start(StandardService.java:519)</SPAN><BR /><SPAN>at org.apache.catalina.core.StandardServer.start(StandardServer.java:710)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Catalina.start(Catalina.java:581)</SPAN><BR /><SPAN>at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)</SPAN><BR /><SPAN>at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)</SPAN><BR /><SPAN>at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)</SPAN><BR /><SPAN>at java.lang.reflect.Method.invoke(Method.java:597)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)</SPAN><BR /><SPAN>at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.core.StandardContext start</SPAN><BR /><SPAN>SEVERE: Error listenerStart</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.core.StandardContext start</SPAN><BR /><SPAN>SEVERE: Context [] startup failed due to previous errors</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-1] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-2] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-3] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-4] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-5] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-6] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-7] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-8] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-9] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_Worker-10] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [Thread-12] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [Timer-0] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread1] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread2] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread3] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread4] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread5] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread6] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread7] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread8] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread9] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [indexThread10] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [DefaultScheduler_QuartzSchedulerThread] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [Timer runner-1,&lt;CL-NAME&gt;,BEST02VMW02-3089] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads</SPAN><BR /><SPAN>SEVERE: The web application [] appears to have started a thread named [TransferQueueBundler,null,null] but has failed to stop it. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [null] (value [com.sun.xml.bind.v2.ClassFactory$1@758d8478]) and a value of type [java.util.WeakHashMap] (value [{class org.alfresco.repo.audit.model._3.PathMap=java.lang.ref.WeakReference@7a2fc0ff, class javax.xml.bind.annotation.W3CDomHandler=java.lang.ref.WeakReference@5527e404, class org.alfresco.repo.audit.model._3.DataGenerator=java.lang.ref.WeakReference@2deaee49, class java.util.ArrayList=java.lang.ref.WeakReference@1ac2122c, class org.alfresco.repo.audit.model._3.DataExtractors=java.lang.ref.WeakReference@3b37146d, class org.alfresco.repo.audit.model._3.Audit=java.lang.ref.WeakReference@1d1e1e7a, class org.alfresco.repo.audit.model._3.GenerateValue=java.lang.ref.WeakReference@2462ea85, class org.alfresco.repo.audit.model._3.DataGenerators=java.lang.ref.WeakReference@5a12d46c, class org.alfresco.repo.audit.model._3.AuditPath=java.lang.ref.WeakReference@a382ca7, class org.alfresco.repo.audit.model._3.DataExtractor=java.lang.ref.WeakReference@6dfb8d2e, class org.alfresco.repo.audit.model._3.PathMappings=java.lang.ref.WeakReference@1df1ff6b, class org.alfresco.repo.audit.model._3.RecordValue=java.lang.ref.WeakReference@7ab7d928, class org.alfresco.repo.audit.model._3.Application=java.lang.ref.WeakReference@3c121009}]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [java.lang.ThreadLocal] (value [java.lang.ThreadLocal@45daddae]) and a value of type [com.ibatis.sqlmap.engine.mapping.result.ResultObjectFactoryUtil.FactorySettings] (value [com.ibatis.sqlmap.engine.mapping.result.ResultObjectFactoryUtil$FactorySettings@11e86299]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [null] (value [org.alfresco.repo.tagging.TagScopePropertyMethodInterceptor$1@2fa133fe]) and a value of type [java.lang.Boolean] (value [true]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [org.alfresco.repo.security.authentication.AuthenticationUtil.ThreadLocalStack] (value [org.alfresco.repo.security.authentication.AuthenticationUtil$ThreadLocalStack@5c8120]) and a value of type [java.util.Stack] (value [[]]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [java.lang.ThreadLocal] (value [java.lang.ThreadLocal@39215c0f]) and a value of type [org.alfresco.repo.search.impl.lucene.index.ReferenceCountingReadOnlyIndexReaderFactory.ReferenceCountingReadOnlyIndexReader] (value [org.alfresco.repo.search.impl.lucene.index.ReferenceCountingReadOnlyIndexReaderFactory$ReferenceCountingReadOnlyIndexReader@150e6233]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [null] (value [com.sun.xml.bind.v2.runtime.Coordinator$1@63510d11]) and a value of type [com.sun.xml.bind.v2.runtime.Coordinator[]] (value [[Lcom.sun.xml.bind.v2.runtime.Coordinator;@5e310a07]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [org.alfresco.repo.policy.BaseBehaviour.StackThreadLocal] (value [org.alfresco.repo.policy.BaseBehaviour$StackThreadLocal@658981e0]) and a value of type [java.util.Stack] (value [[]]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [java.lang.ThreadLocal] (value [java.lang.ThreadLocal@26adcd34]) and a value of type [org.apache.cxf.bus.CXFBusImpl] (value [org.apache.cxf.bus.CXFBusImpl@5c7b24c2]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [org.alfresco.repo.security.authentication.AuthenticationUtil.ThreadLocalStack] (value [org.alfresco.repo.security.authentication.AuthenticationUtil$ThreadLocalStack@18aa6bfd]) and a value of type [java.util.Stack] (value [[]]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:41 PM org.apache.catalina.loader.WebappClassLoader clearThreadLocalMap</SPAN><BR /><SPAN>SEVERE: The web application [] created a ThreadLocal with key of type [java.lang.ThreadLocal] (value [java.lang.ThreadLocal@5c97bbb1]) and a value of type [org.alfresco.util.CachingDateFormat] (value [yyyy-MM-dd]) but failed to remove it when the web application was stopped. This is very likely to create a memory leak.</SPAN><BR /><SPAN>log4j:ERROR LogMananger.repositorySelector was null likely due to error in class reloading, using NOPLoggerRepository.</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.catalina.startup.HostConfig deployDescriptor</SPAN><BR /><SPAN>INFO: Deploying configuration descriptor host-manager.xml</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.catalina.startup.HostConfig deployDescriptor</SPAN><BR /><SPAN>INFO: Deploying configuration descriptor manager.xml</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.coyote.http11.Http11Protocol start</SPAN><BR /><SPAN>INFO: Starting Coyote HTTP/1.1 on http-8180</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.jk.common.ChannelSocket init</SPAN><BR /><SPAN>INFO: JK: ajp13 listening on /0.0.0.0:8109</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.jk.server.JkMain start</SPAN><BR /><SPAN>INFO: Jk running ID=0 time=0/14&nbsp; config=null</SPAN><BR /><SPAN>Apr 17, 2015 1:36:42 PM org.apache.catalina.startup.Catalina start</SPAN><BR /><SPAN>INFO: Server startup in 23674 ms</SPAN><BR /><SPAN>Exception in thread "Timer-0" java.lang.NullPointerException</SPAN><BR /><SPAN>at org.alfresco.util.DynamicallySizedThreadPoolExecutor.execute(DynamicallySizedThreadPoolExecutor.java:88)</SPAN><BR /><SPAN>at org.alfresco.repo.search.impl.lucene.index.IndexInfo$AbstractSchedulable.schedule(IndexInfo.java:3233)</SPAN><BR /><SPAN>at org.alfresco.repo.search.impl.lucene.index.IndexInfo$4.run(IndexInfo.java:797)</SPAN><BR /><SPAN>at java.util.TimerThread.mainLoop(Timer.java:512)</SPAN><BR /><SPAN>at java.util.TimerThread.run(Timer.java:462)</SPAN><BR /><SPAN>Apr 17, 2015 1:38:39 PM org.apache.catalina.loader.WebappClassLoader loadClass</SPAN><BR /><SPAN>INFO: Illegal access: this web application instance has been stopped already.&nbsp; Could not load org.jgroups.util.TimeScheduler2$1.&nbsp; The eventual following stack trace is caused by an error thrown for debugging purposes as well as to attempt to terminate the thread which caused the illegal access, and has no functional impact.</SPAN><BR /><SPAN>java.lang.IllegalStateException</SPAN><BR /><SPAN>at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1531)</SPAN><BR /><SPAN>at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1491)</SPAN><BR /><SPAN>at org.jgroups.util.TimeScheduler2._run(TimeScheduler2.java:294)</SPAN><BR /><SPAN>at org.jgroups.util.TimeScheduler2.run(TimeScheduler2.java:278)</SPAN><BR /><SPAN>at java.lang.Thread.run(Thread.java:662)</SPAN><BR /><SPAN>Exception in thread "Timer runner-1,&lt;CL-NAME&gt;,BEST02VMW02-3089" java.lang.NullPointerException</SPAN><BR /><SPAN>at org.jgroups.logging.Log4JLogImpl.error(Log4JLogImpl.java:64)</SPAN><BR /><SPAN>at org.jgroups.util.TimeScheduler2.run(TimeScheduler2.java:281)</SPAN><BR /><SPAN>at java.lang.Thread.run(Thread.java:662)​</SPAN></BODY></HTML> Fri, 17 Apr 2015 19:07:22 GMT christopher 2015-04-17T19:07:22Z Alfresco failed to start , Mysql5.5 reinstalled https://connect.hyland.com/t5/alfresco-archive/alfresco-failed-to-start-mysql5-5-reinstalled/m-p/308726#M261856 I’m running into a blocker issue, Can someone reply to this earliest?I have a ubuntu system where alfresco enterprise edition3.4.5 was already installed.I reinstalled Mysql5.5 as it was corrupt,din’t take any back up of db.Below are the steps followed.Stopped MysqlStopped alfrescoDeleted all Mysql r Fri, 17 Apr 2015 19:07:22 GMT https://connect.hyland.com/t5/alfresco-archive/alfresco-failed-to-start-mysql5-5-reinstalled/m-p/308726#M261856 christopher 2015-04-17T19:07:22Z Re: Alfresco failed to start , Mysql5.5 reinstalled https://connect.hyland.com/t5/alfresco-archive/alfresco-failed-to-start-mysql5-5-reinstalled/m-p/308727#M261857 <HTML><HEAD></HEAD><BODY><SPAN>Dear Christopher,</SPAN><BR /><BR /><SPAN>Always we need to follow best practice as a backup our content store &lt;data&gt; and SQL script. If we accidently delete something it would help to restore.</SPAN><BR /><SPAN>In your case you removed db without backup. so every sync stuff to contentStore lost. It can't rebuild index without db.</SPAN><BR /></BODY></HTML> Sat, 18 Apr 2015 15:31:22 GMT https://connect.hyland.com/t5/alfresco-archive/alfresco-failed-to-start-mysql5-5-reinstalled/m-p/308727#M261857 g_rathod 2015-04-18T15:31:22Z